GENOMES

Assembly identifier: Zm00092a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: A632
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-A632-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00001d
Project name: B73 Genome Assembly
GenBank BioProject: PRJNA72137
Sample name: PI 550473
DOI: https://dx.doi.org/10.1038/nature22971
Data download: https://download.maizegdb.org/Zm-B73-REFERENCE-GRAMENE-4.0/

Assembly identifier: Zm00001e
Project name: Version 5 of the B73 representative genome for maize
GenBank BioProject: PRJEB32225
Sample name: PI 550473
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-B73-REFERENCE-NAM-5.0

Assembly identifier: Zm00018a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: B97
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-B97-REFERENCE-NAM-1.0

Assembly identifier: Zm00093a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Chang7-2
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Chang-7_2-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00021a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML103
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML103-REFERENCE-NAM-1.0

Assembly identifier: Zm00067a
Project name: Assembly of CIMBL55
GenBank BioProject: PRJNA765111
Sample name: CIMBL55
DOI: https://dx.doi.org/10.1038/s41588-023-01297-y

Assembly identifier: Zm00022a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML228
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML228-REFERENCE-NAM-1.0

Assembly identifier: Zm00023a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML247
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML247-REFERENCE-NAM-1.0

Assembly identifier: Zm00024a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML277
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML277-REFERENCE-NAM-1.0

Assembly identifier: Zm00025a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML322
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML322-REFERENCE-NAM-1.0

Assembly identifier: Zm00026a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML333
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML333-REFERENCE-NAM-1.0

Assembly identifier: Zm00019a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML52
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML52-REFERENCE-NAM-1.0

Assembly identifier: Zm00020a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: CML69
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-CML69-REFERENCE-NAM-1.0

Assembly identifier: Zm00104a
Project name: Dan340 Genome Assembly
GenBank BioProject: PRJNA795201
Sample name: Dan340
DOI: https://dx.doi.org/10.46471/gigabyte.63
Data download: https://download.maizegdb.org/Zm-Dan340-REFERENCE-BAAFS-1.0

Assembly identifier: Zm00094a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Dan340
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Dan340-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00027a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: HP301
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-HP301-REFERENCE-NAM-1.0

Assembly identifier: Zm00095a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Huangzaosi
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Huangzaosi-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00028a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Il14H
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Il14H-REFERENCE-NAM-1.0

Assembly identifier: Zm00096a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Jing724
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Jing724-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00097a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Jing92
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Jing92-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00030a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Ki11
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Ki11-REFERENCE-NAM-1.0

Assembly identifier: Zm00029a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Ki3
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Ki3-REFERENCE-NAM-1.0

Assembly identifier: Zm00031a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Ky21
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Ky21-REFERENCE-NAM-1.0

Assembly identifier: Zm00033a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: M162W
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-M162W-REFERENCE-NAM-1.0

Assembly identifier: Zm00032a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: M37W
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-M37W-REFERENCE-NAM-1.0

Assembly identifier: Zm00009a
Project name: Mo17 Genome Assembly - Yan Lab
GenBank BioProject: PRJNA299869
Sample name: Mo17 PI 558532
DOI: https://dx.doi.org/10.1038/s41467-017-02063-5
Data download: https://download.maizegdb.org/Zm-Mo17-REFERENCE-YAN-1.0/

Assembly identifier: Zm00014ba
Project name: A complete telomere-to-telomere assembly of the maize genome
GenBank BioProject: PRJNA751841
Sample name: Mo17 - 2021
DOI: https://dx.doi.org/10.5281/zenodo.7833112
Data download: https://download.maizegdb.org/Zm-Mo17-REFERENCE-CAU-2.0

Assembly identifier: Zm00034a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Mo18W
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Mo18W-REFERENCE-NAM-1.0

Assembly identifier: Zm00035a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Ms71
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Ms71-REFERENCE-NAM-1.0

Assembly identifier: Zm00036a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: NC350
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-NC350-REFERENCE-NAM-1.0

Assembly identifier: Zm00037a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: NC358
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-NC358-REFERENCE-NAM-1.0

Assembly identifier: Zm00039a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Oh43
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Oh43-REFERENCE-NAM-1.0

Assembly identifier: Zm00038a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Oh7B
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Oh7B-REFERENCE-NAM-1.0

Assembly identifier: Zm00040a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: P39
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-P39-REFERENCE-NAM-1.0

Assembly identifier: Zm00099a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: PH207
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-PH207-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00100a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: S37
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-S37-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00041a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Tx303
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Tx303-REFERENCE-NAM-1.0

Assembly identifier: Zm00042a
Project name: The sequencing and assembly of the 26 maize Nested Association Mapping (NAM) founder lines
GenBank BioProject: PRJEB31061
Sample name: Tzi8
DOI: https://dx.doi.org/10.1126/science.abg5289
Data download: https://download.maizegdb.org/Zm-Tzi8-REFERENCE-NAM-1.0

Assembly identifier: Zm00004b
Project name: W22 (C1:R-r:std - PI 674445) Sequence and Assembly
GenBank BioProject: PRJNA311133
Sample name: W22
DOI: https://dx.doi.org/10.1038/s41588-018-0158-0
Data download: https://download.maizegdb.org/Zm-W22-REFERENCE-NRGENE-2.0/

Assembly identifier: Zm00101a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Xu178
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download : https://download.maizegdb.org/Zm-Xu178-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00102a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Ye478
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Ye478-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00103a
Project name: CAAS Founder Inbred Lines
GenBank BioProject: PRJNA755430
Sample name: Zheng58
DOI: https://dx.doi.org/10.1038/s41588-022-01283-w
Data download: https://download.maizegdb.org/Zm-Zheng58-REFERENCE-CAAS_FIL-1.0

Assembly identifier: Zm00015a
Project name: SK sequence assembly
GenBank BioProject: PRJNA531547
Sample name: SK
DOI: https://dx.doi.org/10.1038/s41588-019-0427-6

Assembly identifier: Zx00001a
Project name: Zea mays ssp. mexicana Genome Assembly - PI 566673
GenBank BioProject: PRJNA299874
Sample name: mexicana PI 566673
DOI: https://dx.doi.org/10.1038/s41467-017-02063-5
Data download: https://download.maizegdb.org/Zx-PI566673-REFERENCE-YAN-1.0/